Life Science and Bioinformatics Landing Page
Useful Documentation
Applying for compute with the ABLeS Scheme:
https://www.biocommons.org.au/ables
Using the Acacia storage system:
Using the job_usage.sh utility:
How to Use the job_usage.sh Pawsey Tool
Using the dedicated Workflow Nodes:
How to Run Workflows on the Workflow Nodes
Interactive computing:
How to Run JupyterLab via Conda
How to Run JupyterLab via Container
How to Run RStudio
Conda:
Conda and Reproducible Installations
Conda Installation and Configuration to Avoid Quota Issues
Installing your own modules:
SHPC (Singularity Registry HPC)
Centrally hosted biology reference datasets:
General Setonix Guide:
Running with GPUs:
Setonix GPU Partition Quick Start
Structural Biology Tools:
Using Boltz v.2.2.1 on AMD GPUs
Using ColabFold on AMD GPUs
Using ESMFold on AMD GPUs
Service Unit Calculator:
https://pawseysc.github.io/su-calculator/
User Guide for Visual Studio Code:
Visual Studio Code for Remote Development